Unique structure and stability of HmuY, a novel heme-binding protein of Porphyromonas gingivalis

2009
journal article
article
86
cris.lastimport.wos2024-04-09T19:36:36Z
dc.abstract.enInfection, survival, and proliferation of pathogenic bacteria in humans depend on their capacity to impair host responses and acquire nutrients in a hostile environment. Among such nutrients is heme, a co-factor for oxygen storage, electron transport, photosynthesis, and redox biochemistry, which is indispensable for life. Porphyromonas gingivalis is the major human bacterial pathogen responsible for severe periodontitis. It recruits heme through HmuY, which sequesters heme from host carriers and delivers it to its cognate outer-membrane transporter, the TonB-dependent receptor HmuR. Here we report that heme binding does not significantly affect the secondary structure of HmuY. The crystal structure of heme-bound HmuY reveals a new all-$\beta$ fold mimicking a right hand. The thumb and fingers pinch heme iron through two apical histidine residues, giving rise to highly symmetric octahedral iron co-ordination. The tetrameric quaternary arrangement of the protein found in the crystal structure is consistent with experiments in solution. It shows that thumbs and fingertips, and, by extension, the bound heme groups, are shielded from competing heme-binding proteins from the host. This may also facilitate heme transport to HmuR for internalization. HmuY, both in its apo- and in its heme-bound forms, is resistant to proteolytic digestion by trypsin and the major secreted proteases of P. gingivalis, gingipains K and R. It is also stable against thermal and chemical denaturation. In conclusion, these studies reveal novel molecular properties of HmuY that are consistent with its role as a putative virulence factor during bacterial infection.pl
dc.affiliationWydział Biochemii, Biofizyki i Biotechnologii : Zakład Mikrobiologiipl
dc.contributor.authorWójtowicz, Halinapl
dc.contributor.authorGuevara, Tibisaypl
dc.contributor.authorTallant, Cynthiapl
dc.contributor.authorOlczak, Mariuszpl
dc.contributor.authorSroka, Aneta - 132027 pl
dc.contributor.authorPotempa, Jan - 131531 pl
dc.contributor.authorSolà, Mariapl
dc.contributor.authorOlczak, Teresapl
dc.contributor.authorGomis-Rüth, F. Xavierpl
dc.date.accessioned2019-01-28T10:27:54Z
dc.date.available2019-01-28T10:27:54Z
dc.date.issued2009pl
dc.date.openaccess0
dc.description.accesstimew momencie opublikowania
dc.description.number5pl
dc.description.versionostateczna wersja wydawcy
dc.description.volume5pl
dc.identifier.articleide1000419pl
dc.identifier.doi10.1371/journal.ppat.1000419pl
dc.identifier.eissn1553-7374pl
dc.identifier.issn1553-7366pl
dc.identifier.projectROD UJ / OPpl
dc.identifier.urihttps://ruj.uj.edu.pl/xmlui/handle/item/66905
dc.languageengpl
dc.language.containerengpl
dc.rightsUdzielam licencji. Uznanie autorstwa 4.0 Międzynarodowa*
dc.rights.licenceCC-BY
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/legalcode.pl*
dc.share.typeotwarte czasopismo
dc.subtypeArticlepl
dc.titleUnique structure and stability of HmuY, a novel heme-binding protein of Porphyromonas gingivalispl
dc.title.journalPLOS Pathogenspl
dc.typeJournalArticlepl
dspace.entity.typePublication
cris.lastimport.wos
2024-04-09T19:36:36Z
dc.abstract.enpl
Infection, survival, and proliferation of pathogenic bacteria in humans depend on their capacity to impair host responses and acquire nutrients in a hostile environment. Among such nutrients is heme, a co-factor for oxygen storage, electron transport, photosynthesis, and redox biochemistry, which is indispensable for life. Porphyromonas gingivalis is the major human bacterial pathogen responsible for severe periodontitis. It recruits heme through HmuY, which sequesters heme from host carriers and delivers it to its cognate outer-membrane transporter, the TonB-dependent receptor HmuR. Here we report that heme binding does not significantly affect the secondary structure of HmuY. The crystal structure of heme-bound HmuY reveals a new all-$\beta$ fold mimicking a right hand. The thumb and fingers pinch heme iron through two apical histidine residues, giving rise to highly symmetric octahedral iron co-ordination. The tetrameric quaternary arrangement of the protein found in the crystal structure is consistent with experiments in solution. It shows that thumbs and fingertips, and, by extension, the bound heme groups, are shielded from competing heme-binding proteins from the host. This may also facilitate heme transport to HmuR for internalization. HmuY, both in its apo- and in its heme-bound forms, is resistant to proteolytic digestion by trypsin and the major secreted proteases of P. gingivalis, gingipains K and R. It is also stable against thermal and chemical denaturation. In conclusion, these studies reveal novel molecular properties of HmuY that are consistent with its role as a putative virulence factor during bacterial infection.
dc.affiliationpl
Wydział Biochemii, Biofizyki i Biotechnologii : Zakład Mikrobiologii
dc.contributor.authorpl
Wójtowicz, Halina
dc.contributor.authorpl
Guevara, Tibisay
dc.contributor.authorpl
Tallant, Cynthia
dc.contributor.authorpl
Olczak, Mariusz
dc.contributor.authorpl
Sroka, Aneta - 132027
dc.contributor.authorpl
Potempa, Jan - 131531
dc.contributor.authorpl
Solà, Maria
dc.contributor.authorpl
Olczak, Teresa
dc.contributor.authorpl
Gomis-Rüth, F. Xavier
dc.date.accessioned
2019-01-28T10:27:54Z
dc.date.available
2019-01-28T10:27:54Z
dc.date.issuedpl
2009
dc.date.openaccess
0
dc.description.accesstime
w momencie opublikowania
dc.description.numberpl
5
dc.description.version
ostateczna wersja wydawcy
dc.description.volumepl
5
dc.identifier.articleidpl
e1000419
dc.identifier.doipl
10.1371/journal.ppat.1000419
dc.identifier.eissnpl
1553-7374
dc.identifier.issnpl
1553-7366
dc.identifier.projectpl
ROD UJ / OP
dc.identifier.uri
https://ruj.uj.edu.pl/xmlui/handle/item/66905
dc.languagepl
eng
dc.language.containerpl
eng
dc.rights*
Udzielam licencji. Uznanie autorstwa 4.0 Międzynarodowa
dc.rights.licence
CC-BY
dc.rights.uri*
http://creativecommons.org/licenses/by/4.0/legalcode.pl
dc.share.type
otwarte czasopismo
dc.subtypepl
Article
dc.titlepl
Unique structure and stability of HmuY, a novel heme-binding protein of Porphyromonas gingivalis
dc.title.journalpl
PLOS Pathogens
dc.typepl
JournalArticle
dspace.entity.type
Publication
Affiliations

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