Ultrafast structural changes direct the first molecular events of vision

2023
journal article
article
60
dc.abstract.enVision is initiated by the rhodopsin family of light-sensitive G protein-coupled receptors (GPCRs)1. A photon is absorbed by the 11-cis retinal chromophore of rhodopsin, which isomerizes within 200 femtoseconds to the all-trans conformation2, thereby initiating the cellular signal transduction processes that ultimately lead to vision. However, the intramolecular mechanism by which the photoactivated retinal induces the activation events inside rhodopsin remains experimentally unclear. Here we use ultrafast time-resolved crystallography at room temperature to determine how an isomerized twisted all-trans retinal stores the photon energy that is required to initiate the protein conformational changes associated with the formation of the G protein-binding signalling state. The distorted retinal at a 1-ps time delay after photoactivation has pulled away from half of its numerous interactions with its binding pocket, and the excess of the photon energy is released through an anisotropic protein breathing motion in the direction of the extracellular space. Notably, the very early structural motions in the protein side chains of rhodopsin appear in regions that are involved in later stages of the conserved class A GPCR activation mechanism. Our study sheds light on the earliest stages of vision in vertebrates and points to fundamental aspects of the molecular mechanisms of agonist-mediated GPCR activation.pl
dc.contributor.authorGruhl, Thomaspl
dc.contributor.authorWeinert, Tobiaspl
dc.contributor.authorRodrigues, Matthew J.pl
dc.contributor.authorMilne, Christopher J.pl
dc.contributor.authorOrtolani, Giorgiapl
dc.contributor.authorNass, Karolpl
dc.contributor.authorNango, Erikopl
dc.contributor.authorSen, Saumikpl
dc.contributor.authorJohnson, Philip J. M.pl
dc.contributor.authorCirelli, Claudiopl
dc.contributor.authorFurrer, Antoniapl
dc.contributor.authorMous, Sandrapl
dc.contributor.authorSkopintsev, Petrpl
dc.contributor.authorJames, Danielpl
dc.contributor.authorDworkowski, Florianpl
dc.contributor.authorBåth, Petrapl
dc.contributor.authorKekilli, Demetpl
dc.contributor.authorOzerov, Dmitrypl
dc.contributor.authorTanaka, Riepl
dc.contributor.authorGlover, Hannahpl
dc.contributor.authorBacellar, Camilapl
dc.contributor.authorBrünle, Steffenpl
dc.contributor.authorCasadei, Cecilia M.pl
dc.contributor.authorDiethelm, Azeglio D.pl
dc.contributor.authorGashi, Dardanpl
dc.contributor.authorGotthard, Guillaumepl
dc.contributor.authorGuixà-González, Ramonpl
dc.contributor.authorJoti, Yasumasapl
dc.contributor.authorKabanova, Victoriapl
dc.contributor.authorKnopp, Gregorpl
dc.contributor.authorLesca, Elenapl
dc.contributor.authorMa, Pikyeepl
dc.contributor.authorMartiel, Isabellepl
dc.contributor.authorMühle, Jonaspl
dc.contributor.authorOwada, Shigekipl
dc.contributor.authorPamula, Filippl
dc.contributor.authorSarabi, Danielpl
dc.contributor.authorTejero, Oliverpl
dc.contributor.authorTsai, Ching-Jupl
dc.contributor.authorVarma, Niranjanpl
dc.contributor.authorWach, Annapl
dc.contributor.authorBoutet, Sébastienpl
dc.contributor.authorTono, Kensukepl
dc.contributor.authorNogły, Przemysław - 464631 pl
dc.contributor.authorDeupi, Xavierpl
dc.contributor.authorIwata, Sopl
dc.contributor.authorNeutze, Richardpl
dc.contributor.authorStandfuss, Jörgpl
dc.contributor.authorSchertler, Gebhardpl
dc.contributor.authorPanneels, Valeriepl
dc.date.accessioned2023-06-27T13:13:10Z
dc.date.available2023-06-27T13:13:10Z
dc.date.issued2023pl
dc.date.openaccess0
dc.description.accesstimew momencie opublikowania
dc.description.additionalBibliogr. Artykuł w wersji elektronicznej na nienumerowanych stronach zawiera dodatkowe materiały z badańpl
dc.description.number7954pl
dc.description.physical939-944, [21]pl
dc.description.versionostateczna wersja wydawcy
dc.description.volume615pl
dc.identifier.doi10.1038/s41586-023-05863-6pl
dc.identifier.eissn1476-4687pl
dc.identifier.issn0028-0836pl
dc.identifier.urihttps://ruj.uj.edu.pl/xmlui/handle/item/312907
dc.languageengpl
dc.language.containerengpl
dc.rightsUdzielam licencji. Uznanie autorstwa 4.0 Międzynarodowa*
dc.rights.licenceCC-BY
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/legalcode.pl*
dc.share.typeinne
dc.subtypeArticlepl
dc.titleUltrafast structural changes direct the first molecular events of visionpl
dc.title.journalNaturepl
dc.typeJournalArticlepl
dspace.entity.typePublication
dc.abstract.enpl
Vision is initiated by the rhodopsin family of light-sensitive G protein-coupled receptors (GPCRs)1. A photon is absorbed by the 11-cis retinal chromophore of rhodopsin, which isomerizes within 200 femtoseconds to the all-trans conformation2, thereby initiating the cellular signal transduction processes that ultimately lead to vision. However, the intramolecular mechanism by which the photoactivated retinal induces the activation events inside rhodopsin remains experimentally unclear. Here we use ultrafast time-resolved crystallography at room temperature to determine how an isomerized twisted all-trans retinal stores the photon energy that is required to initiate the protein conformational changes associated with the formation of the G protein-binding signalling state. The distorted retinal at a 1-ps time delay after photoactivation has pulled away from half of its numerous interactions with its binding pocket, and the excess of the photon energy is released through an anisotropic protein breathing motion in the direction of the extracellular space. Notably, the very early structural motions in the protein side chains of rhodopsin appear in regions that are involved in later stages of the conserved class A GPCR activation mechanism. Our study sheds light on the earliest stages of vision in vertebrates and points to fundamental aspects of the molecular mechanisms of agonist-mediated GPCR activation.
dc.contributor.authorpl
Gruhl, Thomas
dc.contributor.authorpl
Weinert, Tobias
dc.contributor.authorpl
Rodrigues, Matthew J.
dc.contributor.authorpl
Milne, Christopher J.
dc.contributor.authorpl
Ortolani, Giorgia
dc.contributor.authorpl
Nass, Karol
dc.contributor.authorpl
Nango, Eriko
dc.contributor.authorpl
Sen, Saumik
dc.contributor.authorpl
Johnson, Philip J. M.
dc.contributor.authorpl
Cirelli, Claudio
dc.contributor.authorpl
Furrer, Antonia
dc.contributor.authorpl
Mous, Sandra
dc.contributor.authorpl
Skopintsev, Petr
dc.contributor.authorpl
James, Daniel
dc.contributor.authorpl
Dworkowski, Florian
dc.contributor.authorpl
Båth, Petra
dc.contributor.authorpl
Kekilli, Demet
dc.contributor.authorpl
Ozerov, Dmitry
dc.contributor.authorpl
Tanaka, Rie
dc.contributor.authorpl
Glover, Hannah
dc.contributor.authorpl
Bacellar, Camila
dc.contributor.authorpl
Brünle, Steffen
dc.contributor.authorpl
Casadei, Cecilia M.
dc.contributor.authorpl
Diethelm, Azeglio D.
dc.contributor.authorpl
Gashi, Dardan
dc.contributor.authorpl
Gotthard, Guillaume
dc.contributor.authorpl
Guixà-González, Ramon
dc.contributor.authorpl
Joti, Yasumasa
dc.contributor.authorpl
Kabanova, Victoria
dc.contributor.authorpl
Knopp, Gregor
dc.contributor.authorpl
Lesca, Elena
dc.contributor.authorpl
Ma, Pikyee
dc.contributor.authorpl
Martiel, Isabelle
dc.contributor.authorpl
Mühle, Jonas
dc.contributor.authorpl
Owada, Shigeki
dc.contributor.authorpl
Pamula, Filip
dc.contributor.authorpl
Sarabi, Daniel
dc.contributor.authorpl
Tejero, Oliver
dc.contributor.authorpl
Tsai, Ching-Ju
dc.contributor.authorpl
Varma, Niranjan
dc.contributor.authorpl
Wach, Anna
dc.contributor.authorpl
Boutet, Sébastien
dc.contributor.authorpl
Tono, Kensuke
dc.contributor.authorpl
Nogły, Przemysław - 464631
dc.contributor.authorpl
Deupi, Xavier
dc.contributor.authorpl
Iwata, So
dc.contributor.authorpl
Neutze, Richard
dc.contributor.authorpl
Standfuss, Jörg
dc.contributor.authorpl
Schertler, Gebhard
dc.contributor.authorpl
Panneels, Valerie
dc.date.accessioned
2023-06-27T13:13:10Z
dc.date.available
2023-06-27T13:13:10Z
dc.date.issuedpl
2023
dc.date.openaccess
0
dc.description.accesstime
w momencie opublikowania
dc.description.additionalpl
Bibliogr. Artykuł w wersji elektronicznej na nienumerowanych stronach zawiera dodatkowe materiały z badań
dc.description.numberpl
7954
dc.description.physicalpl
939-944, [21]
dc.description.version
ostateczna wersja wydawcy
dc.description.volumepl
615
dc.identifier.doipl
10.1038/s41586-023-05863-6
dc.identifier.eissnpl
1476-4687
dc.identifier.issnpl
0028-0836
dc.identifier.uri
https://ruj.uj.edu.pl/xmlui/handle/item/312907
dc.languagepl
eng
dc.language.containerpl
eng
dc.rights*
Udzielam licencji. Uznanie autorstwa 4.0 Międzynarodowa
dc.rights.licence
CC-BY
dc.rights.uri*
http://creativecommons.org/licenses/by/4.0/legalcode.pl
dc.share.type
inne
dc.subtypepl
Article
dc.titlepl
Ultrafast structural changes direct the first molecular events of vision
dc.title.journalpl
Nature
dc.typepl
JournalArticle
dspace.entity.type
Publication
Affiliations

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