Deep learning-based automatic detection of tuberculosis disease in chest X-ray images

2022
journal article
article
55
dc.abstract.enPurpose: To train a convolutional neural network (CNN) model from scratch to automatically detect tuberculosis (TB) from chest X-ray (CXR) images and compare its performance with transfer learning based technique of different pre-trained CNNs. Material and methods: We used two publicly available datasets of postero-anterior chest radiographs, which are from Montgomery County, Maryland, and Shenzhen, China. A CNN (ConvNet) from scratch was trained to automatically detect TB on chest radiographs. Also, a CNN-based transfer learning approach using five different pre-trained models, including Inception_v3, Xception, ResNet50, VGG19, and VGG16 was utilized for classifying TB and normal cases from CXR images. The performance of models for testing datasets was evaluated using five performances metrics, including accuracy, sensitivity/recall, precision, area under curve (AUC), and F1-score. Results: All proposed models provided an acceptable accuracy for two-class classification. Our proposed CNN architecture (i.e., ConvNet) achieved 88.0% precision, 87.0% sensitivity, 87.0% F1-score, 87.0% accuracy, and AUC of 87.0%, which was slightly less than the pre-trained models. Among all models, Exception, ResNet50, and VGG16 provided the highest classification performance of automated TB classification with precision, sensitivity, F1-score, and AUC of 91.0%, and 90.0% accuracy. Conclusions: Our study presents a transfer learning approach with deep CNNs to automatically classify TB and normal cases from the chest radiographs. The classification accuracy, precision, sensitivity, and F1-score for the detection of TB were found to be more than 87.0% for all models used in the study. Exception, ResNet50, and VGG16 models outperformed other deep CNN models for the datasets with image augmentation methods.pl
dc.contributor.authorShowkatian, Emanpl
dc.contributor.authorSalehi, Mohammadpl
dc.contributor.authorGhaffari, Hamedpl
dc.contributor.authorReiazi, Rezapl
dc.contributor.authorSadighi, Nahidpl
dc.date.accessioned2022-03-29T08:38:26Z
dc.date.available2022-03-29T08:38:26Z
dc.date.issued2022pl
dc.date.openaccess0
dc.description.accesstimew momencie opublikowania
dc.description.additionalBibliogr. s. e123-e124pl
dc.description.physicale118-e124pl
dc.description.versionostateczna wersja wydawcy
dc.description.volume87pl
dc.identifier.doi10.5114/pjr.2022.113435pl
dc.identifier.eissn1899-0967pl
dc.identifier.issn1733-134Xpl
dc.identifier.urihttps://ruj.uj.edu.pl/xmlui/handle/item/289568
dc.languageengpl
dc.language.containerengpl
dc.rightsUdzielam licencji. Uznanie autorstwa - Użycie niekomercyjne - Bez utworów zależnych 4.0 Międzynarodowa*
dc.rights.licenceCC-BY-NC-ND
dc.rights.urihttp://creativecommons.org/licenses/by-nc-nd/4.0/legalcode.pl*
dc.share.typeotwarte czasopismo
dc.subject.entuberculosispl
dc.subject.enmachine learningpl
dc.subject.endeep learningpl
dc.subject.entransfer learningpl
dc.subtypeArticlepl
dc.titleDeep learning-based automatic detection of tuberculosis disease in chest X-ray imagespl
dc.title.journalPolish Journal of Radiologypl
dc.typeJournalArticlepl
dspace.entity.typePublication
dc.abstract.enpl
Purpose: To train a convolutional neural network (CNN) model from scratch to automatically detect tuberculosis (TB) from chest X-ray (CXR) images and compare its performance with transfer learning based technique of different pre-trained CNNs. Material and methods: We used two publicly available datasets of postero-anterior chest radiographs, which are from Montgomery County, Maryland, and Shenzhen, China. A CNN (ConvNet) from scratch was trained to automatically detect TB on chest radiographs. Also, a CNN-based transfer learning approach using five different pre-trained models, including Inception_v3, Xception, ResNet50, VGG19, and VGG16 was utilized for classifying TB and normal cases from CXR images. The performance of models for testing datasets was evaluated using five performances metrics, including accuracy, sensitivity/recall, precision, area under curve (AUC), and F1-score. Results: All proposed models provided an acceptable accuracy for two-class classification. Our proposed CNN architecture (i.e., ConvNet) achieved 88.0% precision, 87.0% sensitivity, 87.0% F1-score, 87.0% accuracy, and AUC of 87.0%, which was slightly less than the pre-trained models. Among all models, Exception, ResNet50, and VGG16 provided the highest classification performance of automated TB classification with precision, sensitivity, F1-score, and AUC of 91.0%, and 90.0% accuracy. Conclusions: Our study presents a transfer learning approach with deep CNNs to automatically classify TB and normal cases from the chest radiographs. The classification accuracy, precision, sensitivity, and F1-score for the detection of TB were found to be more than 87.0% for all models used in the study. Exception, ResNet50, and VGG16 models outperformed other deep CNN models for the datasets with image augmentation methods.
dc.contributor.authorpl
Showkatian, Eman
dc.contributor.authorpl
Salehi, Mohammad
dc.contributor.authorpl
Ghaffari, Hamed
dc.contributor.authorpl
Reiazi, Reza
dc.contributor.authorpl
Sadighi, Nahid
dc.date.accessioned
2022-03-29T08:38:26Z
dc.date.available
2022-03-29T08:38:26Z
dc.date.issuedpl
2022
dc.date.openaccess
0
dc.description.accesstime
w momencie opublikowania
dc.description.additionalpl
Bibliogr. s. e123-e124
dc.description.physicalpl
e118-e124
dc.description.version
ostateczna wersja wydawcy
dc.description.volumepl
87
dc.identifier.doipl
10.5114/pjr.2022.113435
dc.identifier.eissnpl
1899-0967
dc.identifier.issnpl
1733-134X
dc.identifier.uri
https://ruj.uj.edu.pl/xmlui/handle/item/289568
dc.languagepl
eng
dc.language.containerpl
eng
dc.rights*
Udzielam licencji. Uznanie autorstwa - Użycie niekomercyjne - Bez utworów zależnych 4.0 Międzynarodowa
dc.rights.licence
CC-BY-NC-ND
dc.rights.uri*
http://creativecommons.org/licenses/by-nc-nd/4.0/legalcode.pl
dc.share.type
otwarte czasopismo
dc.subject.enpl
tuberculosis
dc.subject.enpl
machine learning
dc.subject.enpl
deep learning
dc.subject.enpl
transfer learning
dc.subtypepl
Article
dc.titlepl
Deep learning-based automatic detection of tuberculosis disease in chest X-ray images
dc.title.journalpl
Polish Journal of Radiology
dc.typepl
JournalArticle
dspace.entity.type
Publication
Affiliations

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