Assessment of solid phase microextraction as a sample preparation tool for untargeted analysis of brain tissue using liquid chromatography-mass spectrometry

2021
journal article
article
18
dc.abstract.enThis work presents an evaluation of solid-phase microextraction (SPME) SPME in combination with liquid chromatography-high resolution mass spectrometry (LC-HRMS) as an analytical approach for untargeted brain analysis. The study included a characterization of the metabolite coverage provided by C18, mixed-mode (MM, with benzene sulfonic acid and C18 functionalities), and hydrophilic lipophilic balanced (HLB) particles as sorbents in SPME coatings after extraction from cow brain homogenate at static conditions. The effects of desorption solvent, extraction time, and chromatographic modes on the metabolite features detected were investigated. Method precision and absolute matrix effects were also assessed. Among the main findings of this work, it was observed that all three tested coating chemistries were able to provide comparable brain tissue information. HLB provided higher responses for polar metabolites; however, as these fibers were prepared in-house, higher inter-fiber relative standard deviations were also observed. C18 and HLB coatings offered similar responses with respect to lipid-related features, whereas MM and C18 provided the best results in terms of method precision. Our results also showed that the use of methanol is essential for effective desorption of non-polar metabolites. Using a reversed-phase chromatographic method, an average of 800 and 1200 brain metabolite features detected in positive and negative modes, respectively, met inter-fibre RSD values below 30% (n=4) after removal of fibre and solvent artefacts from the associated datasets. For features detected using a lipidomics method, a total of 900 and 1800 features detected using C18 fibers in positive and negative mode, respectively, met the same criteria. In terms of absolute matrix effects, the majority of the model metabolites tested showed values between 80 and 120%, which are within the acceptable range. Overall, the findings of this work lay the foundation for further optimization of parameters for SPME-LC-HRMS methods suitable for in vivo and ex vivo brain (and other tissue) untargeted studies, and support the applicability of this approach for non-destructive tissue metabolomics.pl
dc.contributor.authorReyes-Garcés, Nathalypl
dc.contributor.authorBoyacı, Ezelpl
dc.contributor.authorGómez-Ríos, German A.pl
dc.contributor.authorOlkowicz, Mariola - 428620 pl
dc.contributor.authorMonnin, Cianpl
dc.contributor.authorBojko, Barbarapl
dc.contributor.authorVuckovic, Dajanapl
dc.contributor.authorPawliszyn, Januszpl
dc.date.accessioned2022-03-10T12:41:01Z
dc.date.available2022-03-10T12:41:01Z
dc.date.issued2021pl
dc.description.volume1638pl
dc.identifier.articleid461862pl
dc.identifier.doi10.1016/j.chroma.2020.461862pl
dc.identifier.eissn1873-3778pl
dc.identifier.issn0021-9673pl
dc.identifier.urihttps://ruj.uj.edu.pl/xmlui/handle/item/288952
dc.languageengpl
dc.language.containerengpl
dc.rightsDodaję tylko opis bibliograficzny*
dc.rights.licenceBez licencji otwartego dostępu
dc.rights.uri*
dc.subject.enin-vivo-SPMEpl
dc.subject.enbiocompatible SPMEpl
dc.subject.enLC-HRMSpl
dc.subject.enbrain metabolomicspl
dc.subject.entissue metabolomicspl
dc.subtypeArticlepl
dc.titleAssessment of solid phase microextraction as a sample preparation tool for untargeted analysis of brain tissue using liquid chromatography-mass spectrometrypl
dc.title.journalJournal of Chromatography. Apl
dc.typeJournalArticlepl
dspace.entity.typePublication
dc.abstract.enpl
This work presents an evaluation of solid-phase microextraction (SPME) SPME in combination with liquid chromatography-high resolution mass spectrometry (LC-HRMS) as an analytical approach for untargeted brain analysis. The study included a characterization of the metabolite coverage provided by C18, mixed-mode (MM, with benzene sulfonic acid and C18 functionalities), and hydrophilic lipophilic balanced (HLB) particles as sorbents in SPME coatings after extraction from cow brain homogenate at static conditions. The effects of desorption solvent, extraction time, and chromatographic modes on the metabolite features detected were investigated. Method precision and absolute matrix effects were also assessed. Among the main findings of this work, it was observed that all three tested coating chemistries were able to provide comparable brain tissue information. HLB provided higher responses for polar metabolites; however, as these fibers were prepared in-house, higher inter-fiber relative standard deviations were also observed. C18 and HLB coatings offered similar responses with respect to lipid-related features, whereas MM and C18 provided the best results in terms of method precision. Our results also showed that the use of methanol is essential for effective desorption of non-polar metabolites. Using a reversed-phase chromatographic method, an average of 800 and 1200 brain metabolite features detected in positive and negative modes, respectively, met inter-fibre RSD values below 30% (n=4) after removal of fibre and solvent artefacts from the associated datasets. For features detected using a lipidomics method, a total of 900 and 1800 features detected using C18 fibers in positive and negative mode, respectively, met the same criteria. In terms of absolute matrix effects, the majority of the model metabolites tested showed values between 80 and 120%, which are within the acceptable range. Overall, the findings of this work lay the foundation for further optimization of parameters for SPME-LC-HRMS methods suitable for in vivo and ex vivo brain (and other tissue) untargeted studies, and support the applicability of this approach for non-destructive tissue metabolomics.
dc.contributor.authorpl
Reyes-Garcés, Nathaly
dc.contributor.authorpl
Boyacı, Ezel
dc.contributor.authorpl
Gómez-Ríos, German A.
dc.contributor.authorpl
Olkowicz, Mariola - 428620
dc.contributor.authorpl
Monnin, Cian
dc.contributor.authorpl
Bojko, Barbara
dc.contributor.authorpl
Vuckovic, Dajana
dc.contributor.authorpl
Pawliszyn, Janusz
dc.date.accessioned
2022-03-10T12:41:01Z
dc.date.available
2022-03-10T12:41:01Z
dc.date.issuedpl
2021
dc.description.volumepl
1638
dc.identifier.articleidpl
461862
dc.identifier.doipl
10.1016/j.chroma.2020.461862
dc.identifier.eissnpl
1873-3778
dc.identifier.issnpl
0021-9673
dc.identifier.uri
https://ruj.uj.edu.pl/xmlui/handle/item/288952
dc.languagepl
eng
dc.language.containerpl
eng
dc.rights*
Dodaję tylko opis bibliograficzny
dc.rights.licence
Bez licencji otwartego dostępu
dc.rights.uri*
dc.subject.enpl
in-vivo-SPME
dc.subject.enpl
biocompatible SPME
dc.subject.enpl
LC-HRMS
dc.subject.enpl
brain metabolomics
dc.subject.enpl
tissue metabolomics
dc.subtypepl
Article
dc.titlepl
Assessment of solid phase microextraction as a sample preparation tool for untargeted analysis of brain tissue using liquid chromatography-mass spectrometry
dc.title.journalpl
Journal of Chromatography. A
dc.typepl
JournalArticle
dspace.entity.type
Publication
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