Structural insights into 3-[5-(chlorobenzylidene)rhodanine]propionic acid isomers with antibacterial activity

2025
journal article
article
dc.abstract.enThe rhodanine derivatives are a group of com­pounds known for their pharmacological action. Four new crystal structures of 3-[5-(chloro­benzyl­idene)rhodanine]propionic acid isomers, characterized by X-ray diffraction analysis and theoretical calculations, are reported. 3-[5-(2-Chloro­benzyl­idene)-4-oxo-2-sulfanyl­idene-1,3-thia­zoliden-3-yl]propanoic acid, $C_{13}H_{10}ClNO_{3}S_{2}$, 1, crystallizes in the space group $P2_{1}/c$, with one mol­ecule in the asymmetric unit. The other com­pounds, namely, 3-[5-(3-chloro­benzyl­idene)-4-oxo-2-sulfanyl­idene-1,3-thia­zoliden-3-yl]propanoic acid, $C_{13}H_{10}ClNO_{3}S_{2}$, 2 and its polymorph 2p, and 3-[5-(4-chloro­benzyl­idene)-4-oxo-2-sulfanyl­idene-1,3-thia­zoliden-3-yl]pro­pan­oic acid, C13H10ClNO3S2, 3, crystallize in the triclinic centrosymmetric space group, with one mol­ecule in the asymmetric unit. The geometry of the created polymorphs indicates differences in the conformation of the carb­oxy­ethyl moiety and the position of the chlorine substituent on the aromatic ring. The crystal packing in all four presented crystal structures is dominated by inter­molecular O—H⋯O hy­dro­gen bonds. The calculated energies of the presented com­pounds show that the most biologically active, i.e. 1, has the lowest stability, while the least active, i.e. 3, is the most stable. Several theoretical descriptors were used to correlate the structural features of the studied com­pounds with their biological activity.
dc.affiliationWydział Chemii : Zakład Chemii Ogólnej
dc.affiliationWydział Chemii : Zakład Krystalochemii i Krystalofizyki
dc.contributor.authorTejchman, Waldemar
dc.contributor.authorZborowski, Krzysztof - 101661
dc.contributor.authorNitek, Wojciech - 130975
dc.contributor.authorŻesławska, Ewa
dc.date.accessioned2025-07-07T10:57:54Z
dc.date.available2025-07-07T10:57:54Z
dc.date.createdat2025-07-07T08:20:30Zen
dc.date.issued2025
dc.description.number7
dc.description.physical420-429
dc.description.volumeC81
dc.identifier.doi10.1107/S2053229625005169
dc.identifier.eissn2053-2296
dc.identifier.urihttps://ruj.uj.edu.pl/handle/item/555164
dc.languageeng
dc.language.containereng
dc.rightsDodaję tylko opis bibliograficzny
dc.rights.licenceBez licencji otwartego dostępu
dc.subject.encrystal structure
dc.subject.enhy­dro­gen bonding
dc.subject.enrhodanine derivatives
dc.subject.enanti­bacterial activity
dc.subject.enDFT calculations
dc.subtypeArticle
dc.titleStructural insights into 3-[5-(chlorobenzylidene)rhodanine]propionic acid isomers with antibacterial activity
dc.title.journalActa crystallographica. Section C, Structural chemistry
dc.typeJournalArticle
dspace.entity.typePublicationen
dc.abstract.en
The rhodanine derivatives are a group of com­pounds known for their pharmacological action. Four new crystal structures of 3-[5-(chloro­benzyl­idene)rhodanine]propionic acid isomers, characterized by X-ray diffraction analysis and theoretical calculations, are reported. 3-[5-(2-Chloro­benzyl­idene)-4-oxo-2-sulfanyl­idene-1,3-thia­zoliden-3-yl]propanoic acid, $C_{13}H_{10}ClNO_{3}S_{2}$, 1, crystallizes in the space group $P2_{1}/c$, with one mol­ecule in the asymmetric unit. The other com­pounds, namely, 3-[5-(3-chloro­benzyl­idene)-4-oxo-2-sulfanyl­idene-1,3-thia­zoliden-3-yl]propanoic acid, $C_{13}H_{10}ClNO_{3}S_{2}$, 2 and its polymorph 2p, and 3-[5-(4-chloro­benzyl­idene)-4-oxo-2-sulfanyl­idene-1,3-thia­zoliden-3-yl]pro­pan­oic acid, C13H10ClNO3S2, 3, crystallize in the triclinic centrosymmetric space group, with one mol­ecule in the asymmetric unit. The geometry of the created polymorphs indicates differences in the conformation of the carb­oxy­ethyl moiety and the position of the chlorine substituent on the aromatic ring. The crystal packing in all four presented crystal structures is dominated by inter­molecular O—H⋯O hy­dro­gen bonds. The calculated energies of the presented com­pounds show that the most biologically active, i.e. 1, has the lowest stability, while the least active, i.e. 3, is the most stable. Several theoretical descriptors were used to correlate the structural features of the studied com­pounds with their biological activity.
dc.affiliation
Wydział Chemii : Zakład Chemii Ogólnej
dc.affiliation
Wydział Chemii : Zakład Krystalochemii i Krystalofizyki
dc.contributor.author
Tejchman, Waldemar
dc.contributor.author
Zborowski, Krzysztof - 101661
dc.contributor.author
Nitek, Wojciech - 130975
dc.contributor.author
Żesławska, Ewa
dc.date.accessioned
2025-07-07T10:57:54Z
dc.date.available
2025-07-07T10:57:54Z
dc.date.createdaten
2025-07-07T08:20:30Z
dc.date.issued
2025
dc.description.number
7
dc.description.physical
420-429
dc.description.volume
C81
dc.identifier.doi
10.1107/S2053229625005169
dc.identifier.eissn
2053-2296
dc.identifier.uri
https://ruj.uj.edu.pl/handle/item/555164
dc.language
eng
dc.language.container
eng
dc.rights
Dodaję tylko opis bibliograficzny
dc.rights.licence
Bez licencji otwartego dostępu
dc.subject.en
crystal structure
dc.subject.en
hy­dro­gen bonding
dc.subject.en
rhodanine derivatives
dc.subject.en
anti­bacterial activity
dc.subject.en
DFT calculations
dc.subtype
Article
dc.title
Structural insights into 3-[5-(chlorobenzylidene)rhodanine]propionic acid isomers with antibacterial activity
dc.title.journal
Acta crystallographica. Section C, Structural chemistry
dc.type
JournalArticle
dspace.entity.typeen
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