Software for 3D diagnostic image reconstruction and analysis

2005
journal article
article
dc.abstract.enBackground: Recent advances in computer technologies have opened new frontiers in medical diagnostics. Interesting possibilities are the use of three-dimensional (3D) imaging and the combination of images from different modalities. Software prepared in our laboratories devoted to 3D image reconstruction and analysis from computed tomography and ultrasonography is presented. In developing our software it was assumed that it should be applicable in standard medical practice, i.e. it should work effectively with a PC. An additional feature is the possibility of combining 3D images from different modalities. Materials/Methods: The program was tested on a PC using DICOM data from computed tomography and TIFF files obtained from a 3D ultrasound system. The results of the anthropomorphic phantom and patient data were taken into consideration. A new approach was used to achieve spatial correlation of two independently obtained 3D images. The method relies on the use of four pairs of markers within the regions under consideration. The user selects the markers manually and the computer calculates the transformations necessary for coupling the images. Results: The main software feature is the possibility of 3D image reconstruction from a series of twodimensional (2D) images. The reconstructed 3D image can be: (1) viewed with the most popular methods of 3D image viewing, (2) filtered and processed to improve image quality, (3) analyzed quantitatively (geometrical measurements), and (4) coupled with another, independently acquired 3D image. The reconstructed and processed 3D image can be stored at every stage of image processing. The overall software performance was good considering the relatively low costs of the hardware used and the huge data sets processed. The program can be freely used and tested (source code and program available at http://www.biofizyka.cm-uj.krakow.pl). Improvements allowing the processing of new data types and new procedures can be implemented for specific demands. Conclusions: The reconstruction and data processing can be conducted using a standard PC, so low investment costs result in the introduction of advanced and useful diagnostic possibilities.pl
dc.affiliationWydział Lekarski : Zakład Radiologiipl
dc.affiliationWydział Lekarski : Klinika Chirurgii Ogólnej, Onkologicznej i Gastroenterologicznejpl
dc.affiliationWydział Lekarski : I Katedra Chirurgii Ogólnejpl
dc.affiliationWydział Lekarski : Zakład Biofizykipl
dc.contributor.authorTatoń, Grzegorz - 133654 pl
dc.contributor.authorRokita, Eugeniusz - 133291 pl
dc.contributor.authorSierżęga, Marek - 133388 pl
dc.contributor.authorKłęk, Stanisław - 229533 pl
dc.contributor.authorKulig, Jan - 130535 pl
dc.contributor.authorUrbanik, Andrzej - 133713 pl
dc.date.accession2021-03-24pl
dc.date.accessioned2021-03-24T16:45:21Z
dc.date.available2021-03-24T16:45:21Z
dc.date.issued2005pl
dc.date.openaccess0
dc.description.accesstimew momencie opublikowania
dc.description.additionalBibliogr. s. 72pl
dc.description.number3pl
dc.description.physical64-72pl
dc.description.versionostateczna wersja wydawcy
dc.description.volume70pl
dc.identifier.articleid177561pl
dc.identifier.eissn1899-0967pl
dc.identifier.issn1733-134Xpl
dc.identifier.projectROD UJ / OPpl
dc.identifier.urihttps://ruj.uj.edu.pl/xmlui/handle/item/268030
dc.identifier.weblinkhttp://archiwum.inforadiologia.pl/download/index/idArt/177561.htmlpl
dc.languagepolpl
dc.language.containerpolpl
dc.rightsUdzielam licencji. Uznanie autorstwa - Użycie niekomercyjne - Bez utworów zależnych 4.0 Międzynarodowa*
dc.rights.licenceCC-BY-NC-ND
dc.rights.urihttp://creativecommons.org/licenses/by-nc-nd/4.0/legalcode.pl*
dc.share.typeotwarte czasopismo
dc.subject.en3D imagingpl
dc.subject.en3D image reconstructionpl
dc.subject.enimage analysispl
dc.subject.en3D image registrationpl
dc.subtypeArticlepl
dc.titleSoftware for 3D diagnostic image reconstruction and analysispl
dc.title.alternativeOprogramowanie do rekonstrukcji i analizy 3D obrazów diagnostycznychpl
dc.title.journalPolish Journal of Radiologypl
dc.typeJournalArticlepl
dspace.entity.typePublication
dc.abstract.enpl
Background: Recent advances in computer technologies have opened new frontiers in medical diagnostics. Interesting possibilities are the use of three-dimensional (3D) imaging and the combination of images from different modalities. Software prepared in our laboratories devoted to 3D image reconstruction and analysis from computed tomography and ultrasonography is presented. In developing our software it was assumed that it should be applicable in standard medical practice, i.e. it should work effectively with a PC. An additional feature is the possibility of combining 3D images from different modalities. Materials/Methods: The program was tested on a PC using DICOM data from computed tomography and TIFF files obtained from a 3D ultrasound system. The results of the anthropomorphic phantom and patient data were taken into consideration. A new approach was used to achieve spatial correlation of two independently obtained 3D images. The method relies on the use of four pairs of markers within the regions under consideration. The user selects the markers manually and the computer calculates the transformations necessary for coupling the images. Results: The main software feature is the possibility of 3D image reconstruction from a series of twodimensional (2D) images. The reconstructed 3D image can be: (1) viewed with the most popular methods of 3D image viewing, (2) filtered and processed to improve image quality, (3) analyzed quantitatively (geometrical measurements), and (4) coupled with another, independently acquired 3D image. The reconstructed and processed 3D image can be stored at every stage of image processing. The overall software performance was good considering the relatively low costs of the hardware used and the huge data sets processed. The program can be freely used and tested (source code and program available at http://www.biofizyka.cm-uj.krakow.pl). Improvements allowing the processing of new data types and new procedures can be implemented for specific demands. Conclusions: The reconstruction and data processing can be conducted using a standard PC, so low investment costs result in the introduction of advanced and useful diagnostic possibilities.
dc.affiliationpl
Wydział Lekarski : Zakład Radiologii
dc.affiliationpl
Wydział Lekarski : Klinika Chirurgii Ogólnej, Onkologicznej i Gastroenterologicznej
dc.affiliationpl
Wydział Lekarski : I Katedra Chirurgii Ogólnej
dc.affiliationpl
Wydział Lekarski : Zakład Biofizyki
dc.contributor.authorpl
Tatoń, Grzegorz - 133654
dc.contributor.authorpl
Rokita, Eugeniusz - 133291
dc.contributor.authorpl
Sierżęga, Marek - 133388
dc.contributor.authorpl
Kłęk, Stanisław - 229533
dc.contributor.authorpl
Kulig, Jan - 130535
dc.contributor.authorpl
Urbanik, Andrzej - 133713
dc.date.accessionpl
2021-03-24
dc.date.accessioned
2021-03-24T16:45:21Z
dc.date.available
2021-03-24T16:45:21Z
dc.date.issuedpl
2005
dc.date.openaccess
0
dc.description.accesstime
w momencie opublikowania
dc.description.additionalpl
Bibliogr. s. 72
dc.description.numberpl
3
dc.description.physicalpl
64-72
dc.description.version
ostateczna wersja wydawcy
dc.description.volumepl
70
dc.identifier.articleidpl
177561
dc.identifier.eissnpl
1899-0967
dc.identifier.issnpl
1733-134X
dc.identifier.projectpl
ROD UJ / OP
dc.identifier.uri
https://ruj.uj.edu.pl/xmlui/handle/item/268030
dc.identifier.weblinkpl
http://archiwum.inforadiologia.pl/download/index/idArt/177561.html
dc.languagepl
pol
dc.language.containerpl
pol
dc.rights*
Udzielam licencji. Uznanie autorstwa - Użycie niekomercyjne - Bez utworów zależnych 4.0 Międzynarodowa
dc.rights.licence
CC-BY-NC-ND
dc.rights.uri*
http://creativecommons.org/licenses/by-nc-nd/4.0/legalcode.pl
dc.share.type
otwarte czasopismo
dc.subject.enpl
3D imaging
dc.subject.enpl
3D image reconstruction
dc.subject.enpl
image analysis
dc.subject.enpl
3D image registration
dc.subtypepl
Article
dc.titlepl
Software for 3D diagnostic image reconstruction and analysis
dc.title.alternativepl
Oprogramowanie do rekonstrukcji i analizy 3D obrazów diagnostycznych
dc.title.journalpl
Polish Journal of Radiology
dc.typepl
JournalArticle
dspace.entity.type
Publication
Affiliations

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