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Probing the active site of class 3 L-asparaginase by mutagenesis : mutations of the ser-lys tandems of ReAV
hydrolase
amidohydrolase
L-asparaginase
leukemia
metalloprotein
site-directed mutagenesis
Nessler reaction
ITC
X-ray crystallography
The ReAV enzyme from Rhizobium etli, a representative of Class 3 L-asparaginases, is sequentially and structurally different from other known L-asparaginases. This distinctiveness makes ReAV a candidate for novel antileukemic therapies. ReAV is a homodimeric protein, with each subunit containing a highly specific zinc-binding site created by two cysteines, a lysine, and a water molecule. Two Ser-Lys tandems (Ser48-Lys51, Ser80-Lys263) are located in the close proximity of the metal binding site, with Ser48 hypothesized to be the catalytic nucleophile. To further investigate the catalytic process of ReAV, site-directed mutagenesis was employed to introduce alanine substitutions at residues from the Ser-Lys tandems and at Arg47, located near the Ser48-Lys51 tandem. These mutational studies, along with enzymatic assays and X-ray structure determinations, demonstrated that substitution of each of these highly conserved residues abolished the catalytic activity, confirming their essential role in enzyme mechanism.
dc.abstract.en | The ReAV enzyme from Rhizobium etli, a representative of Class 3 L-asparaginases, is sequentially and structurally different from other known L-asparaginases. This distinctiveness makes ReAV a candidate for novel antileukemic therapies. ReAV is a homodimeric protein, with each subunit containing a highly specific zinc-binding site created by two cysteines, a lysine, and a water molecule. Two Ser-Lys tandems (Ser48-Lys51, Ser80-Lys263) are located in the close proximity of the metal binding site, with Ser48 hypothesized to be the catalytic nucleophile. To further investigate the catalytic process of ReAV, site-directed mutagenesis was employed to introduce alanine substitutions at residues from the Ser-Lys tandems and at Arg47, located near the Ser48-Lys51 tandem. These mutational studies, along with enzymatic assays and X-ray structure determinations, demonstrated that substitution of each of these highly conserved residues abolished the catalytic activity, confirming their essential role in enzyme mechanism. | |
dc.affiliation | Wydział Chemii : Zakład Krystalochemii i Krystalofizyki | |
dc.contributor.author | Pokrywka, Kinga | |
dc.contributor.author | Grzechowiak, Marta | |
dc.contributor.author | Sliwiak, Joanna | |
dc.contributor.author | Worsztynowicz, Paulina | |
dc.contributor.author | Loch, Joanna - 126313 | |
dc.contributor.author | Ruszkowski, Milosz | |
dc.contributor.author | Gilski, Miroslaw | |
dc.contributor.author | Jaskolski, Mariusz | |
dc.date.accession | 2025-07-07 | |
dc.date.accessioned | 2025-07-07T10:32:59Z | |
dc.date.available | 2025-07-07T10:32:59Z | |
dc.date.createdat | 2025-07-04T08:53:49Z | en |
dc.date.issued | 2025 | |
dc.date.openaccess | 0 | |
dc.description.accesstime | w momencie opublikowania | |
dc.description.number | 7 | |
dc.description.version | ostateczna wersja wydawcy | |
dc.description.volume | 15 | |
dc.identifier.articleid | 944 | |
dc.identifier.doi | 10.3390/biom15070944 | |
dc.identifier.eissn | 2218-273X | |
dc.identifier.project | DRC AI | |
dc.identifier.uri | https://ruj.uj.edu.pl/handle/item/555160 | |
dc.identifier.weblink | https://www.mdpi.com/2218-273X/15/7/944 | |
dc.language | eng | |
dc.language.container | eng | |
dc.rights | Udzielam licencji. Uznanie autorstwa 4.0 Międzynarodowa | |
dc.rights.licence | CC-BY | |
dc.rights.uri | http://creativecommons.org/licenses/by/4.0/legalcode.pl | |
dc.share.type | otwarte czasopismo | |
dc.subject.en | hydrolase | |
dc.subject.en | amidohydrolase | |
dc.subject.en | L-asparaginase | |
dc.subject.en | leukemia | |
dc.subject.en | metalloprotein | |
dc.subject.en | site-directed mutagenesis | |
dc.subject.en | Nessler reaction | |
dc.subject.en | ITC | |
dc.subject.en | X-ray crystallography | |
dc.subtype | Article | |
dc.title | Probing the active site of class 3 L-asparaginase by mutagenesis : mutations of the ser-lys tandems of ReAV | |
dc.title.journal | Biomolecules | |
dc.type | JournalArticle | |
dspace.entity.type | Publication | en |
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