Structural diversity of crystalline copper(II) / L–arginine compounds by bromide as ligand and/or counterions– X–ray, spectroscopic, and theoretical studies

2026
journal article
article
dc.abstract.enTwo novel copper(II) l–argininato coordination compounds: trans–$[Cu(l–Arg)_{2}(H_{2}O)_{2}$]$Br_{2}$·$2H_{2}O$ (1) and [Cu(l–Arg)(phen)Br]Br·$1.5H_{2}O$ (2) (where l–Arg = l–arginine and phen = 1,10–phenanthroline) were synthetized and comprehensively investigated to clarify the impact of the bromide, acting as two counterions in 1 and as both a caunterion and a ligand in 2, on the self–organization and molecular and electronic structures. Data on the crystal, molecular and electronic structures of compounds 1 and 2 were obtained via X–ray diffraction. These results formed the basis for the subsequent theoretical characterization of intramolecular interactions via electron density distribution in metal–ligand bonds using the atoms in molecules (AIM) method, and characterization of intermolecular interactions via Hirshfeld surface analysis (HAS). Additionally, the charge on copper(II) ions modified by electron transfer from ligands was determined using the natural bond orbitals (NBO). Furthermore, the following spectroscopic techniques were applied to establish correlations between molecular and electronic structures: FT–IR, Raman, NIR–VIS–UV, X– and Q–band EPR, and fluorescence.
dc.affiliationWydział Biochemii, Biofizyki i Biotechnologii : Zakład Biofizyki Molekularnej
dc.contributor.authorWojciechowska, Agnieszka
dc.contributor.authorGągor, Anna
dc.contributor.authorRowińska, Magdalena
dc.contributor.authorEl-Naggar, Mostafa A.
dc.contributor.authorSoliman, Saied M.
dc.contributor.authorHelios, Katarzyna
dc.contributor.authorCyprych, Konrad
dc.contributor.authorSzukalski, Adam
dc.contributor.authorSarewicz, Marcin - 173402
dc.contributor.authorJezierska, Julia
dc.date.accessioned2026-07-03T12:23:37Z
dc.date.available2026-07-03T12:23:37Z
dc.date.createdat2026-07-02T14:17:18Zen
dc.date.issued2026
dc.date.openaccess0
dc.description.accesstimew momencie opublikowania
dc.description.additionalBibliogr.
dc.description.versionostateczna wersja wydawcy
dc.description.volume1374
dc.identifier.articleid146784
dc.identifier.doi10.1016/j.molstruc.2026.146784
dc.identifier.issn0022-2860
dc.identifier.projectDRC AI
dc.identifier.urihttps://ruj.uj.edu.pl/handle/item/577019
dc.languageeng
dc.language.containereng
dc.rightsUdzielam licencji. Uznanie autorstwa 4.0 Międzynarodowa
dc.rights.licenceCC-BY
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/legalcode.pl
dc.share.typeinne
dc.source.integratorfalse
dc.subject.encopper(II) complexes
dc.subject.enL–arginine
dc.subject.enbromide ions
dc.subject.enX–ray crystal structure
dc.subject.enspectroscopy
dc.subtypeArticle
dc.titleStructural diversity of crystalline copper(II) / L–arginine compounds by bromide as ligand and/or counterions– X–ray, spectroscopic, and theoretical studies
dc.title.journalJournal of Molecular Structure
dc.typeJournalArticle
dspace.entity.typePublicationen
dc.abstract.en
Two novel copper(II) l–argininato coordination compounds: trans–$[Cu(l–Arg)_{2}(H_{2}O)_{2}$]$Br_{2}$·$2H_{2}O$ (1) and [Cu(l–Arg)(phen)Br]Br·$1.5H_{2}O$ (2) (where l–Arg = l–arginine and phen = 1,10–phenanthroline) were synthetized and comprehensively investigated to clarify the impact of the bromide, acting as two counterions in 1 and as both a caunterion and a ligand in 2, on the self–organization and molecular and electronic structures. Data on the crystal, molecular and electronic structures of compounds 1 and 2 were obtained via X–ray diffraction. These results formed the basis for the subsequent theoretical characterization of intramolecular interactions via electron density distribution in metal–ligand bonds using the atoms in molecules (AIM) method, and characterization of intermolecular interactions via Hirshfeld surface analysis (HAS). Additionally, the charge on copper(II) ions modified by electron transfer from ligands was determined using the natural bond orbitals (NBO). Furthermore, the following spectroscopic techniques were applied to establish correlations between molecular and electronic structures: FT–IR, Raman, NIR–VIS–UV, X– and Q–band EPR, and fluorescence.
dc.affiliation
Wydział Biochemii, Biofizyki i Biotechnologii : Zakład Biofizyki Molekularnej
dc.contributor.author
Wojciechowska, Agnieszka
dc.contributor.author
Gągor, Anna
dc.contributor.author
Rowińska, Magdalena
dc.contributor.author
El-Naggar, Mostafa A.
dc.contributor.author
Soliman, Saied M.
dc.contributor.author
Helios, Katarzyna
dc.contributor.author
Cyprych, Konrad
dc.contributor.author
Szukalski, Adam
dc.contributor.author
Sarewicz, Marcin - 173402
dc.contributor.author
Jezierska, Julia
dc.date.accessioned
2026-07-03T12:23:37Z
dc.date.available
2026-07-03T12:23:37Z
dc.date.createdaten
2026-07-02T14:17:18Z
dc.date.issued
2026
dc.date.openaccess
0
dc.description.accesstime
w momencie opublikowania
dc.description.additional
Bibliogr.
dc.description.version
ostateczna wersja wydawcy
dc.description.volume
1374
dc.identifier.articleid
146784
dc.identifier.doi
10.1016/j.molstruc.2026.146784
dc.identifier.issn
0022-2860
dc.identifier.project
DRC AI
dc.identifier.uri
https://ruj.uj.edu.pl/handle/item/577019
dc.language
eng
dc.language.container
eng
dc.rights
Udzielam licencji. Uznanie autorstwa 4.0 Międzynarodowa
dc.rights.licence
CC-BY
dc.rights.uri
http://creativecommons.org/licenses/by/4.0/legalcode.pl
dc.share.type
inne
dc.source.integrator
false
dc.subject.en
copper(II) complexes
dc.subject.en
L–arginine
dc.subject.en
bromide ions
dc.subject.en
X–ray crystal structure
dc.subject.en
spectroscopy
dc.subtype
Article
dc.title
Structural diversity of crystalline copper(II) / L–arginine compounds by bromide as ligand and/or counterions– X–ray, spectroscopic, and theoretical studies
dc.title.journal
Journal of Molecular Structure
dc.type
JournalArticle
dspace.entity.typeen
Publication
Affiliations

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