High intraspecific genetic and morphological variation in the pioneer lichen Cladonia rei colonising slag dumps

2014
journal article
article
2
cris.lastimport.wos2024-04-09T22:34:39Z
dc.abstract.enThis study investigates the genetic and morphological variability of the lichen Cladonia rei inhabiting strongly contaminated postsmelting slag dumps in southern Poland. Altogether, 27 C. rei samples were analysed, including 17 from a single population in one dump. The phylogenetic analysis includes samples of C. rei, outgroup species, and external sequences of Cladonia section representatives from GenBank. Comparative analysis of the internal transcribed spacer (ITS) rDNA sequences revealed the presence of 19 C. rei haplotypes overall, including several of the most frequent, of which 11 are represented by single individuals only. As many as 12 haplotypes were recorded within a single population. Three strongly supported monophyletic clades comprised of specimens from different geographical regions were recovered. Morphometric analysis showed great phenotypic variability within particular clades. Apart from a full range of previously known morphological forms of the species, an additional specific morphotype was recognised in the dumps; however, its representatives do not create a monophyletic group. High genetic variability within a single population suggests that C. rei has a great potential for colonising anthropogenic habitats. This attribute emphasises the role of this lichen as an essential pioneer in the early stages of natural regeneration of such sites.pl
dc.affiliationWydział Biologii i Nauk o Ziemi : Instytut Botanikipl
dc.contributor.authorOsyczka, Piotr - 131216 pl
dc.contributor.authorSkubała, Kaja - 106128 pl
dc.contributor.authorLenart-Boroń, Annapl
dc.contributor.authorBoroń, Piotrpl
dc.date.accessioned2015-04-09T07:44:54Z
dc.date.available2015-04-09T07:44:54Z
dc.date.issued2014pl
dc.date.openaccess0
dc.description.accesstimew momencie opublikowania
dc.description.additionalKaja Skubała podpisana Kaja Rolapl
dc.description.number5pl
dc.description.physical579-591pl
dc.description.versionostateczna wersja wydawcy
dc.description.volume9pl
dc.identifier.doi10.2478/s11535-014-0286-1pl
dc.identifier.eissn1644-3632pl
dc.identifier.issn1895-104Xpl
dc.identifier.projectROD UJ / Ppl
dc.identifier.urihttp://ruj.uj.edu.pl/xmlui/handle/item/4671
dc.languageengpl
dc.language.containerengpl
dc.rightsUdzielam licencji. Uznanie autorstwa - Użycie niekomercyjne - Bez utworów zależnych 3.0 Polska*
dc.rights.licenceCC-BY-NC-ND
dc.rights.urihttp://creativecommons.org/licenses/by-nc-nd/3.0/legalcode*
dc.share.typeotwarte czasopismo
dc.subject.enCladoniapl
dc.subject.enLichenized ascomycotapl
dc.subject.engenetic variationpl
dc.subject.enphylogenetic analysispl
dc.subject.enITSpl
dc.subject.enhaplotypepl
dc.subject.enmorphometric analysispl
dc.subject.enanthropogenic habitatpl
dc.subtypeArticlepl
dc.titleHigh intraspecific genetic and morphological variation in the pioneer lichen Cladonia rei colonising slag dumpspl
dc.title.journalCentral European Journal of Biologypl
dc.typeJournalArticlepl
dspace.entity.typePublication
cris.lastimport.wos
2024-04-09T22:34:39Z
dc.abstract.enpl
This study investigates the genetic and morphological variability of the lichen Cladonia rei inhabiting strongly contaminated postsmelting slag dumps in southern Poland. Altogether, 27 C. rei samples were analysed, including 17 from a single population in one dump. The phylogenetic analysis includes samples of C. rei, outgroup species, and external sequences of Cladonia section representatives from GenBank. Comparative analysis of the internal transcribed spacer (ITS) rDNA sequences revealed the presence of 19 C. rei haplotypes overall, including several of the most frequent, of which 11 are represented by single individuals only. As many as 12 haplotypes were recorded within a single population. Three strongly supported monophyletic clades comprised of specimens from different geographical regions were recovered. Morphometric analysis showed great phenotypic variability within particular clades. Apart from a full range of previously known morphological forms of the species, an additional specific morphotype was recognised in the dumps; however, its representatives do not create a monophyletic group. High genetic variability within a single population suggests that C. rei has a great potential for colonising anthropogenic habitats. This attribute emphasises the role of this lichen as an essential pioneer in the early stages of natural regeneration of such sites.
dc.affiliationpl
Wydział Biologii i Nauk o Ziemi : Instytut Botaniki
dc.contributor.authorpl
Osyczka, Piotr - 131216
dc.contributor.authorpl
Skubała, Kaja - 106128
dc.contributor.authorpl
Lenart-Boroń, Anna
dc.contributor.authorpl
Boroń, Piotr
dc.date.accessioned
2015-04-09T07:44:54Z
dc.date.available
2015-04-09T07:44:54Z
dc.date.issuedpl
2014
dc.date.openaccess
0
dc.description.accesstime
w momencie opublikowania
dc.description.additionalpl
Kaja Skubała podpisana Kaja Rola
dc.description.numberpl
5
dc.description.physicalpl
579-591
dc.description.version
ostateczna wersja wydawcy
dc.description.volumepl
9
dc.identifier.doipl
10.2478/s11535-014-0286-1
dc.identifier.eissnpl
1644-3632
dc.identifier.issnpl
1895-104X
dc.identifier.projectpl
ROD UJ / P
dc.identifier.uri
http://ruj.uj.edu.pl/xmlui/handle/item/4671
dc.languagepl
eng
dc.language.containerpl
eng
dc.rights*
Udzielam licencji. Uznanie autorstwa - Użycie niekomercyjne - Bez utworów zależnych 3.0 Polska
dc.rights.licence
CC-BY-NC-ND
dc.rights.uri*
http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode
dc.share.type
otwarte czasopismo
dc.subject.enpl
Cladonia
dc.subject.enpl
Lichenized ascomycota
dc.subject.enpl
genetic variation
dc.subject.enpl
phylogenetic analysis
dc.subject.enpl
ITS
dc.subject.enpl
haplotype
dc.subject.enpl
morphometric analysis
dc.subject.enpl
anthropogenic habitat
dc.subtypepl
Article
dc.titlepl
High intraspecific genetic and morphological variation in the pioneer lichen Cladonia rei colonising slag dumps
dc.title.journalpl
Central European Journal of Biology
dc.typepl
JournalArticle
dspace.entity.type
Publication
Affiliations

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