Modeling hysteresis observed in the human erythrocyte voltage-dependent cation channel

2012
journal article
article
7
dc.abstract.enThe non-selective voltage-activated cation channel from human red cells, which is activated at depolarizing potentials, has been shown to exhibit counter-clockwise gating hysteresis. Here, we analyze this phenomenon with the simplest possible phenomenological models. Specifically, the hysteresis cycle, including its direction, is reproduced by a model with 2×2 discrete states: the normal open/closed states and two different states of "gate tension". Rates of transitions between the two branches of the hysteresis curve are modeled with single-barrier kinetics by introducing a real-valued "reaction coordinate" parametrizing the protein's conformational change between the two states of gate tension. The resulting scenario suggests a reanalysis of former experiments with NSVDC channels.pl
dc.affiliationWydział Fizyki, Astronomii i Informatyki Stosowanej : Instytut Fizyki im. Mariana Smoluchowskiegopl
dc.contributor.authorFlyvbjerg, Henrikpl
dc.contributor.authorGudowska-Nowak, Ewa - 128235 pl
dc.contributor.authorChristophersen, Pallepl
dc.contributor.authorBennekou, Poulpl
dc.date.accessioned2016-08-09T09:07:43Z
dc.date.available2016-08-09T09:07:43Z
dc.date.issued2012pl
dc.date.openaccess0
dc.description.accesstimew momencie opublikowania
dc.description.number11pl
dc.description.physical2117-2140pl
dc.description.versionostateczna wersja wydawcy
dc.description.volume43pl
dc.identifier.doi10.5506/APhysPolB.43.2117pl
dc.identifier.eissn1509-5770pl
dc.identifier.issn0587-4254pl
dc.identifier.projectROD UJ / Ppl
dc.identifier.urihttp://ruj.uj.edu.pl/xmlui/handle/item/29443
dc.languageengpl
dc.language.containerengpl
dc.rightsUdzielam licencji. Uznanie autorstwa 4.0 Międzynarodowa*
dc.rights.licenceCC-BY
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/legalcode.pl*
dc.share.typeotwarte czasopismo
dc.subtypeArticlepl
dc.titleModeling hysteresis observed in the human erythrocyte voltage-dependent cation channelpl
dc.title.journalActa Physica Polonica. Bpl
dc.typeJournalArticlepl
dspace.entity.typePublication
dc.abstract.enpl
The non-selective voltage-activated cation channel from human red cells, which is activated at depolarizing potentials, has been shown to exhibit counter-clockwise gating hysteresis. Here, we analyze this phenomenon with the simplest possible phenomenological models. Specifically, the hysteresis cycle, including its direction, is reproduced by a model with 2×2 discrete states: the normal open/closed states and two different states of "gate tension". Rates of transitions between the two branches of the hysteresis curve are modeled with single-barrier kinetics by introducing a real-valued "reaction coordinate" parametrizing the protein's conformational change between the two states of gate tension. The resulting scenario suggests a reanalysis of former experiments with NSVDC channels.
dc.affiliationpl
Wydział Fizyki, Astronomii i Informatyki Stosowanej : Instytut Fizyki im. Mariana Smoluchowskiego
dc.contributor.authorpl
Flyvbjerg, Henrik
dc.contributor.authorpl
Gudowska-Nowak, Ewa - 128235
dc.contributor.authorpl
Christophersen, Palle
dc.contributor.authorpl
Bennekou, Poul
dc.date.accessioned
2016-08-09T09:07:43Z
dc.date.available
2016-08-09T09:07:43Z
dc.date.issuedpl
2012
dc.date.openaccess
0
dc.description.accesstime
w momencie opublikowania
dc.description.numberpl
11
dc.description.physicalpl
2117-2140
dc.description.version
ostateczna wersja wydawcy
dc.description.volumepl
43
dc.identifier.doipl
10.5506/APhysPolB.43.2117
dc.identifier.eissnpl
1509-5770
dc.identifier.issnpl
0587-4254
dc.identifier.projectpl
ROD UJ / P
dc.identifier.uri
http://ruj.uj.edu.pl/xmlui/handle/item/29443
dc.languagepl
eng
dc.language.containerpl
eng
dc.rights*
Udzielam licencji. Uznanie autorstwa 4.0 Międzynarodowa
dc.rights.licence
CC-BY
dc.rights.uri*
http://creativecommons.org/licenses/by/4.0/legalcode.pl
dc.share.type
otwarte czasopismo
dc.subtypepl
Article
dc.titlepl
Modeling hysteresis observed in the human erythrocyte voltage-dependent cation channel
dc.title.journalpl
Acta Physica Polonica. B
dc.typepl
JournalArticle
dspace.entity.type
Publication
Affiliations

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